Construction of fulllength cDNA library from stem cambium of Populus simonii ×P. nigra with SMART strategy
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Graphical Abstract
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Abstract
In order to investigate the key genes during wood formation, total RNA was extracted from the stem cambium tissue of twoyearold Populus simonii × P. nigra. The firststrand cDNA was synthesized using switching mechanism at 5′ end of RNA transcript (SMART) technology, and double strand cDNA was synthesized with LDPCR. Then double strand cDNA was cut by SfiⅠ restriction enzyme and ligated with pDNRLIB vector. The recombinant plasmid was transformed into Escherichia coli DH5α by electroporation. The library quality was evaluated, and the results showed that the titer of primary cDNA library and amplified cDNA library were 218×106 pfu/mL and 546×109 pfu/mL, respectively, with the recombination rate of 96%. The inserted fragments were distributed from 05 to 20 kb, and its average size was 112 kb. These results indicate that the P. simonii ×P. nigra cDNA library is constructed successfully.
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