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    7种观赏桃新种质的TP-M13-SSR分子标记鉴定及亲缘关系分析

    Identification of TP-M13-SSR molecular markers and genetic relationship analysis of seven new ornamental peach germplasms

    • 摘要:
        目的  以7份选育出的观赏桃新种质和15份市面上常见桃品种的叶片为试验材料,通过简单重复序列(SSR)分子标记对其遗传多样性及亲缘关系进行分析鉴定,旨在探讨新种质与市面上常见桃品种的种间遗传距离与亲缘关系,为观赏桃起源演化、开发利用和亲本选配提供参考。
        方法  利用36对引物进行TP-M13-SSR PCR扩增以及荧光毛细管电泳检测,并对扩增产物的扩增效率及引物多态性进行分析。对7份观赏桃新种质‘T20’、‘T22’、‘T28’、‘T10’、‘T13’、‘T9-1’、‘早花’与15份已有常见桃品种的亲缘关系进行鉴定,利用6个SSR位点构建22份观赏桃种质资源的指纹图谱,进行Neighbor-Joining聚类并结合表型性状开展综合分析。
        结果  36对引物中筛选得到25对高多态性引物,共检测到183个多态性等位基因和98.396个有效等位基因,观察杂合度平均值为0.341,预期杂合度平均值为0.739,Shannon’s信息指数平均值为1.546,引物多态性信息指数平均值为0.683,介于0.510 ~ 0.841之间。新种质‘T20’和‘T10’与已有‘台阶’品种相似系数最大,分别为0.95和0.92,‘T20’和‘台阶’的枝型、花瓣颜色及花瓣类型等表型性状都相同;新种质‘T13’与已有‘五宝桃’品种相似系数最大,为0.86;新种质‘T22’与已有各品种相似系数很小,其表型性状与其余21份种质相比有较大不同;新种质‘T9-1’和‘早花’与已有‘朱粉垂枝’品种相似系数最大,为0.94。
        结论  本研究通过构建SSR指纹图谱,更加直观和快捷的对观赏桃种质资源进行鉴定,为后期观赏桃种质资源的创新、种质资源库的建立及种质资源的保护与利用提供技术与理论支撑。

       

      Abstract:
        Objective  Genetic diversity and genetic relationship of the leaves from 15 commercially available common types and 7 new ornamental peach germplasms were studied and identified by simple sequence repeat (SSR). The purpose of this study was to explore the genetic distance between the new germplasm and commercially available common varieties, and to provide reference for the origin, evolution, development and utilization of ornamental peach and parental selection.
        Method  TP-M13-SSR PCR amplification and fluorescent capillary electrophoresis detection were carried out using 36 pairs of primers, and the amplification efficiency and polymorphism were analyzed. Genetic relationship of new ornamental peach germplasm ‘T13’, ‘T9-1’, ‘T10’, ‘T20’, ‘T22’ and ‘Zaohua’ was identified, and fingerprints of 22 ornamental peach germplasm resources were constructed using 6 SSR loci, and Neighbor-Joining clustering and comprehensive analysis combined with phenotypic traits was performed.
        Result  36 pairs of highly polymorphic primers were screened from 29 pairs of primers. A total of 183 polymorphic alleles and 98.396 effective alleles were detected. Average of observed heterozygosity was 0.341, and average of expected heterozygosity was 0.739. Average of Shannon’s information index was 1.546, and average of polymorphism information content of primer was 0.683, ranging from 0.510 to 0.841. The new germplasm ‘T20’ and ‘T10’ had the largest similarity coefficients with the existing variety ‘Taijie’, which were 0.95 and 0.92, respectively. ‘T20’ and ‘Taijie’ had the same phenotypic traits, including branch shape, petal color and petal type. The new germplasm ‘T13’ and the existing variety ‘Wubao tao’ had the highest similarity coefficient, which was 0.86. Similarity coefficient between the new germplasm ‘T22’ and other existing varieties was very small, and its phenotypic characters were quite different from the other 21 germplasms. Similarity coefficient of the new germplasm ‘T9-1’ and ‘Zaohua’ with the existing variety ‘Zhufen chuizhi’ was the largest, which was 0.94.
        Conclusion  In this study, through the construction of SSR fingerprint map, the ornamental peach germplasm resources can be identified more intuitively and quickly, providing technical and theoretical support for the later innovation of ornamental peach germplasm resources, the establishment of germplasm resource banks, and the protection and utilization of germplasm resources.

       

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