应用流式细胞术测定18个中国古老月季基因组大小
Estimation of genome size of eighteen Chinese old garden roses by flow cytometry
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摘要: 以18个中国古老月季为试材,以欧芹作为标准植物,采用2种不同的样本处理方法对其基因组大小进行测定,同时利用染色体计数法补充3个存在争议或尚未见报道的中国古老月季品种的倍性,为其基因组大小的确定提供必需的数据支持。结果表明:1)中国古老月季品种‘屏东月季'为二倍体(2n=2x=14),‘桔囊'和‘牡丹月季'为四倍体(2n=4x=28)。2)2种样本处理方法通过单因素方差分析发现,6个品种间差异显著,12个品种间差异不显著。故2种处理方法均可用于基因组大小的检测,但方法Ⅱ准确度高,受外界影响小,更适宜基因组大小的检测。方法Ⅰ操作简便,可用于大规模的倍性检测。3)18个中国古老月季品种(含二倍体、三倍体、四倍体)的基因组大小在0.62~0.71pg之间,其中二倍体品种2C DNA含量范围为1.34~1.43pg,C值范围为0.67~0.71pg;三倍体2C DNA含量范围为1.96~2.05pg,C值范围为0.65~0.68pg;四倍体2C DNA含量范围为2.49~2.63pg,C值范围为0.62~0.66pg。二倍体基因组最大,三倍体居中,四倍体最小。本研究找到了适宜的流式细胞术样本处理方法,并检测出18个中国古老月季品种的基因组大小,为揭示中国古老月季的起源与进化提供了依据,也为其之后的基因组测序工作奠定了基础。Abstract: Using Petroselinum crispum as the calibration standard, we used two different test processes to estimate the genome size of Chinese old garden rose. Using chromosome counting method, we also determined the ploidy level of three Chinese old garden rose cultivars, which are still in debate or have not been reported, to offer necessary support for estimating the genome size. Main results are as follows. 1) The Chinese old garden rose cultivar ‘Pingdong Yueji' is diploid (2n=2x=14), while ‘Jünang' and ‘Mudan Yueji' are tetraploid (2n=4x=28). 2) Significant differences were observed in six cultivars, but no significant differences in other twelve cultivars in both two test processes, in which the method II was more accurate and stable to estimate the genome size. Method I was easier in operating and more suitable for detecting ploidy level. 3) The genome size of 18 Chinese old garden rose cultivars (including diploid, triploid and tetraploid cultivars) ranged from 0.62pg to 0.71pg. The 2C DNA amounts of diploid cultivars ranged between 1.34-1.43pg, and C-value varied from 0.67pg to 1.43pg. The 2C DNA amounts of triploid cultivars ranged between 1.96-2.05pg, and C-value between 0.65-0.68pg. The 2C DNA amounts of tetraploid varieties varied from 2.49 to 2.63pg, and C-value from 0.62 to 0.66pg. Diploid cultivars possess the largest genome, followed by the triploid ones, and tetraploid ones the least. We selected the optimum pretreatment method for estimating the genome sizes of 18 Chinese old garden rose cultivars using flow cytometry. Our results offer theory for revealing the relationship between the origin and evolution of Chinese old garden rose, and lay a foundation for their genomic sequencing.